Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Gm13216-201ENSMUST00000117145 591 ntBASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rab40cQ8VHQ4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gm10418-201ENSMUST00000100943 576 ntBASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gm29791-202ENSMUST00000207888 369 ntBASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rab40cQ8VHQ4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab40cQ8VHQ4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab40cQ8VHQ4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab40cQ8VHQ4 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Gm13234-201ENSMUST00000120010 747 ntBASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab40cQ8VHQ4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms