Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccdc65Q8VHI7 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.3■□□□□ 0.52
Ccdc65Q8VHI7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc65Q8VHI7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc65Q8VHI7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Gm5643-201ENSMUST00000117081 966 ntBASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc65Q8VHI7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.28■□□□□ 0.52
Ccdc65Q8VHI7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Gm18025-201ENSMUST00000221733 862 ntBASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Ccdc65Q8VHI7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Ccdc65Q8VHI7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc65Q8VHI7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc65Q8VHI7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Gm13168-201ENSMUST00000121771 632 ntBASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Gm15378-201ENSMUST00000121894 207 ntBASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Gm8520-201ENSMUST00000186517 868 ntBASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc65Q8VHI7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms