Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Retreg1dQ8VE91 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retreg1dQ8VE91 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Gm7977-201ENSMUST00000193787 748 ntBASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Tgds-204ENSMUST00000228543 1594 ntBASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retreg1dQ8VE91 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Odf3b-204ENSMUST00000227834 930 ntBASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retreg1dQ8VE91 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Gm10517-202ENSMUST00000192970 758 ntBASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Gm3375-201ENSMUST00000203929 796 ntBASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retreg1dQ8VE91 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gm12085-201ENSMUST00000119263 940 ntBASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.1■□□□□ 0.33
Retreg1dQ8VE91 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retreg1dQ8VE91 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms