Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndc1Q8VCB1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndc1Q8VCB1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndc1Q8VCB1 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.33■□□□□ 0.21
Ndc1Q8VCB1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ndc1Q8VCB1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Ndc1Q8VCB1 Gm13401-201ENSMUST00000117074 291 ntBASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Gm27463-201ENSMUST00000183569 57 ntBASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ndc1Q8VCB1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Gm29791-202ENSMUST00000207888 369 ntBASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ndc1Q8VCB1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ndc1Q8VCB1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Fst-202ENSMUST00000223640 2612 ntBASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ndc1Q8VCB1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ndc1Q8VCB1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms