Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Gm11249-201ENSMUST00000117071 859 ntBASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Gm27275-201ENSMUST00000184318 272 ntBASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ssx2ipQ8VC66 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Gm10812-201ENSMUST00000099864 546 ntBASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ssx2ipQ8VC66 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.77■□□□□ 0.43
Ssx2ipQ8VC66 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Mir6349-201ENSMUST00000184059 97 ntBASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ssx2ipQ8VC66 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gm10418-201ENSMUST00000100943 576 ntBASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ssx2ipQ8VC66 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ssx2ipQ8VC66 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ssx2ipQ8VC66 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms