Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf8Q8VC56 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.7■□□□□ 0.26
Rnf8Q8VC56 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.69■□□□□ 0.26
Rnf8Q8VC56 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Flg-201ENSMUST00000050758 1488 ntBASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Gm12527-201ENSMUST00000117967 564 ntBASIC16.69■□□□□ 0.26
Rnf8Q8VC56 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf8Q8VC56 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Dio3-201ENSMUST00000097228 1449 ntBASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf8Q8VC56 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Gm8520-201ENSMUST00000186517 868 ntBASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rnf8Q8VC56 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf8Q8VC56 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf8Q8VC56 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms