Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh3kbp1Q8R550 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh3kbp1Q8R550 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Idnk-204ENSMUST00000226010 1898 ntBASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Gm7889-201ENSMUST00000185591 958 ntBASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3kbp1Q8R550 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3kbp1Q8R550 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3kbp1Q8R550 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Gm29791-202ENSMUST00000207888 369 ntBASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3kbp1Q8R550 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3kbp1Q8R550 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms