Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Gm11539-201ENSMUST00000119837 557 ntBASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Gm13436-201ENSMUST00000120418 567 ntBASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chrna3Q8R4G9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna3Q8R4G9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna3Q8R4G9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna3Q8R4G9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna3Q8R4G9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chrna3Q8R4G9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Gm6433-201ENSMUST00000118634 875 ntBASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chrna3Q8R4G9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Gm13559-201ENSMUST00000120476 863 ntBASIC17■□□□□ 0.31
Chrna3Q8R4G9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 AC158538.1-201ENSMUST00000225870 294 ntBASIC17■□□□□ 0.31
Chrna3Q8R4G9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chrna3Q8R4G9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Mir8112-201ENSMUST00000184382 131 ntBASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Gm8969-201ENSMUST00000199694 526 ntBASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Chrna3Q8R4G9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chrna3Q8R4G9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms