Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Chmp7Q8R1T1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Gm28033-201ENSMUST00000184224 96 ntBASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Chmp7Q8R1T1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Gm11860-201ENSMUST00000122346 1010 ntBASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Gm6623-201ENSMUST00000173570 544 ntBASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Gm37722-201ENSMUST00000193757 208 ntBASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Chmp7Q8R1T1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Chmp7Q8R1T1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Chmp7Q8R1T1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Gm18669-201ENSMUST00000216049 778 ntBASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Chmp7Q8R1T1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Chmp7Q8R1T1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Dmtn-210ENSMUST00000228824 2377 ntBASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Mir770-201ENSMUST00000103252 94 ntBASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Chmp7Q8R1T1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Chmp7Q8R1T1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms