Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nudcd3Q8R1N4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Nudcd3Q8R1N4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nudcd3Q8R1N4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nudcd3Q8R1N4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nudcd3Q8R1N4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nudcd3Q8R1N4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 Gm38285-201ENSMUST00000192928 922 ntBASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.3■□□□□ 0.36
Nudcd3Q8R1N4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms