Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.1■□□□□ 0.17
H2afjQ8R1M2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Gm15039-201ENSMUST00000118914 875 ntBASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
H2afjQ8R1M2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
H2afjQ8R1M2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.08■□□□□ 0.17
H2afjQ8R1M2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afjQ8R1M2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afjQ8R1M2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
H2afjQ8R1M2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Gm44549-201ENSMUST00000208351 577 ntBASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afjQ8R1M2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Flg-201ENSMUST00000050758 1488 ntBASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afjQ8R1M2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms