Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Zcchc9Q8R1J3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Zcchc9Q8R1J3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Zcchc9Q8R1J3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.22■□□□□ 0.35
Zcchc9Q8R1J3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Gm27741-201ENSMUST00000185060 237 ntBASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Zcchc9Q8R1J3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms