Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Atf7Q8R0S1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Atf7Q8R0S1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Atf7Q8R0S1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Atf7Q8R0S1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Atf7Q8R0S1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf7Q8R0S1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf7Q8R0S1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Atf7Q8R0S1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Gm27011-201ENSMUST00000182352 972 ntBASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Atf7Q8R0S1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Mir1199-201ENSMUST00000117015 119 ntBASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Atf7Q8R0S1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Atf7Q8R0S1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms