Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx54Q8K4L0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx54Q8K4L0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx54Q8K4L0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
Ddx54Q8K4L0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx54Q8K4L0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Gm12350-201ENSMUST00000121208 462 ntBASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ddx54Q8K4L0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Ddx54Q8K4L0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx54Q8K4L0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Gm10060-201ENSMUST00000212002 111 ntBASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx54Q8K4L0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC22.6■■□□□ 1.21
Ddx54Q8K4L0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44357-201ENSMUST00000195897 142 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm19658-201ENSMUST00000196231 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44367-201ENSMUST00000196836 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44350-201ENSMUST00000197197 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44390-201ENSMUST00000197533 144 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44313-201ENSMUST00000198018 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44486-201ENSMUST00000198508 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44454-201ENSMUST00000198541 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44314-201ENSMUST00000199263 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44394-201ENSMUST00000199558 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44484-201ENSMUST00000199873 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44466-201ENSMUST00000200264 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Gm44359-201ENSMUST00000200671 138 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 CT943659.1-201ENSMUST00000215459 326 ntBASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx54Q8K4L0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ddx54Q8K4L0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms