Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lin28aQ8K3Y3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lin28aQ8K3Y3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Gm7638-201ENSMUST00000121348 967 ntBASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin28aQ8K3Y3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Gm27463-201ENSMUST00000183569 57 ntBASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin28aQ8K3Y3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Gm10231-201ENSMUST00000181584 441 ntBASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin28aQ8K3Y3 Gm10175-202ENSMUST00000208752 441 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms