Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Gm18284-201ENSMUST00000172604 624 ntBASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl47Q8K2Y7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Mrpl47Q8K2Y7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Mrpl47Q8K2Y7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Gm26571-201ENSMUST00000181399 666 ntBASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Gm42569-201ENSMUST00000200539 472 ntBASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
Mrpl47Q8K2Y7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mrpl47Q8K2Y7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mrpl47Q8K2Y7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mrpl47Q8K2Y7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mrpl47Q8K2Y7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms