Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.27■□□□□ 0.84
Paf1Q8K2T8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Paf1Q8K2T8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Paf1Q8K2T8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Paf1Q8K2T8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Paf1Q8K2T8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Paf1Q8K2T8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Paf1Q8K2T8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Gm38027-201ENSMUST00000192315 235 ntBASIC20.23■□□□□ 0.83
Paf1Q8K2T8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Paf1Q8K2T8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Gm3375-201ENSMUST00000203929 796 ntBASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Paf1Q8K2T8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Gm12085-201ENSMUST00000119263 940 ntBASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.21■□□□□ 0.83
Paf1Q8K2T8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms