Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgcs1Q8JZK9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Gm10138-203ENSMUST00000206952 366 ntBASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Hmgcs1Q8JZK9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Gm11249-201ENSMUST00000117071 859 ntBASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Mir6349-201ENSMUST00000184059 97 ntBASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hmgcs1Q8JZK9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Gm15375-201ENSMUST00000119510 849 ntBASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hmgcs1Q8JZK9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.52■□□□□ 0.24
Hmgcs1Q8JZK9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.52■□□□□ 0.23
Hmgcs1Q8JZK9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.52■□□□□ 0.23
Hmgcs1Q8JZK9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcs1Q8JZK9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hmgcs1Q8JZK9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hmgcs1Q8JZK9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Hmgcs1Q8JZK9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Gm11643-201ENSMUST00000119578 864 ntBASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmgcs1Q8JZK9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms