Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rfwd3Q8CIK8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Gm13401-201ENSMUST00000117074 291 ntBASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rfwd3Q8CIK8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfwd3Q8CIK8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfwd3Q8CIK8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfwd3Q8CIK8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rfwd3Q8CIK8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.27■□□□□ 0.19
Rfwd3Q8CIK8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfwd3Q8CIK8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfwd3Q8CIK8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms