Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Depdc1aQ8CIG0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.52■□□□□ 0.71
Depdc1aQ8CIG0 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depdc1aQ8CIG0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Gm18958-201ENSMUST00000174258 762 ntBASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Gm6345-202ENSMUST00000180900 204 ntBASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.5■□□□□ 0.71
Depdc1aQ8CIG0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gm27389-201ENSMUST00000183622 195 ntBASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Gm8969-201ENSMUST00000199694 526 ntBASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.49■□□□□ 0.71
Depdc1aQ8CIG0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Actl10-202ENSMUST00000226583 1501 ntBASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depdc1aQ8CIG0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depdc1aQ8CIG0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depdc1aQ8CIG0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms