Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ShfQ8CG80 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ShfQ8CG80 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ShfQ8CG80 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ShfQ8CG80 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ShfQ8CG80 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.46■□□□□ 0.07
ShfQ8CG80 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.46■□□□□ 0.07
ShfQ8CG80 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.46■□□□□ 0.07
ShfQ8CG80 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Gm6576-201ENSMUST00000169678 883 ntBASIC15.46■□□□□ 0.07
ShfQ8CG80 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ShfQ8CG80 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ShfQ8CG80 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ShfQ8CG80 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ShfQ8CG80 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ShfQ8CG80 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.45■□□□□ 0.06
ShfQ8CG80 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
ShfQ8CG80 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.45■□□□□ 0.06
ShfQ8CG80 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.45■□□□□ 0.06
ShfQ8CG80 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.45■□□□□ 0.06
ShfQ8CG80 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ShfQ8CG80 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.44■□□□□ 0.06
ShfQ8CG80 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Dio3-201ENSMUST00000097228 1449 ntBASIC15.44■□□□□ 0.06
ShfQ8CG80 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ShfQ8CG80 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.44■□□□□ 0.06
ShfQ8CG80 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ShfQ8CG80 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.43■□□□□ 0.06
ShfQ8CG80 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Gm5408-201ENSMUST00000197998 747 ntBASIC15.43■□□□□ 0.06
ShfQ8CG80 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ShfQ8CG80 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.43■□□□□ 0.06
ShfQ8CG80 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ShfQ8CG80 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ShfQ8CG80 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ShfQ8CG80 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.42■□□□□ 0.06
ShfQ8CG80 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms