Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhb7Q8CDY9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhb7Q8CDY9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Gm13158-201ENSMUST00000122007 736 ntBASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb7Q8CDY9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Gm29791-202ENSMUST00000207888 369 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb7Q8CDY9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms