Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Fam228aQ8CDW1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Gm2399-201ENSMUST00000104944 225 ntBASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Fam228aQ8CDW1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam228aQ8CDW1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Gm6365-201ENSMUST00000054711 744 ntBASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Zfp783-201ENSMUST00000095946 670 ntBASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam228aQ8CDW1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Gm7291-201ENSMUST00000199147 382 ntBASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam228aQ8CDW1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.16■□□□□ 0.5
Fam228aQ8CDW1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms