Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ccdc178Q8CDV0 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ccdc178Q8CDV0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Gm15565-201ENSMUST00000118890 427 ntBASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Gm5417-201ENSMUST00000079706 384 ntBASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccdc178Q8CDV0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc178Q8CDV0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc178Q8CDV0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc178Q8CDV0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Ccdc178Q8CDV0 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.52■□□□□ 0.87
Ccdc178Q8CDV0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc178Q8CDV0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc178Q8CDV0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc178Q8CDV0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc178Q8CDV0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc178Q8CDV0 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.49■□□□□ 0.87
Ccdc178Q8CDV0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms