Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc38Q8CDN8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Gm18025-201ENSMUST00000221733 862 ntBASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.24■□□□□ 0.67
Ccdc38Q8CDN8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc38Q8CDN8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc38Q8CDN8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc38Q8CDN8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Gm42545-201ENSMUST00000202755 922 ntBASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc38Q8CDN8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Gm12527-201ENSMUST00000117967 564 ntBASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc38Q8CDN8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms