Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vcpip1Q8CDG3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Gm10138-203ENSMUST00000206952 366 ntBASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vcpip1Q8CDG3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vcpip1Q8CDG3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Gm20049-201ENSMUST00000219950 730 ntBASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Vcpip1Q8CDG3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Vcpip1Q8CDG3 Gm13401-201ENSMUST00000117074 291 ntBASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Gm11643-201ENSMUST00000119578 864 ntBASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Vcpip1Q8CDG3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Vcpip1Q8CDG3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms