Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8CD60 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Q8CD60 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Q8CD60 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8CD60 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.18■□□□□ 0.5
Q8CD60 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Timm23-208ENSMUST00000226683 750 ntBASIC18.18■□□□□ 0.5
Q8CD60 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8CD60 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Q8CD60 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Q8CD60 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Q8CD60 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Q8CD60 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.17■□□□□ 0.5
Q8CD60 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.17■□□□□ 0.5
Q8CD60 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.17■□□□□ 0.5
Q8CD60 Gm10252-201ENSMUST00000209541 832 ntBASIC18.17■□□□□ 0.5
Q8CD60 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Q8CD60 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Q8CD60 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Q8CD60 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.16■□□□□ 0.5
Q8CD60 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Q8CD60 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.16■□□□□ 0.5
Q8CD60 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.16■□□□□ 0.5
Q8CD60 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.16■□□□□ 0.5
Q8CD60 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Q8CD60 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Q8CD60 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.16■□□□□ 0.5
Q8CD60 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Q8CD60 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Q8CD60 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.15■□□□□ 0.5
Q8CD60 Gm38027-201ENSMUST00000192315 235 ntBASIC18.15■□□□□ 0.5
Q8CD60 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Gm3375-201ENSMUST00000203929 796 ntBASIC18.15■□□□□ 0.5
Q8CD60 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Q8CD60 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Q8CD60 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Q8CD60 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Q8CD60 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Q8CD60 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.14■□□□□ 0.49
Q8CD60 Gm21814-202ENSMUST00000203277 873 ntBASIC18.14■□□□□ 0.49
Q8CD60 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Q8CD60 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Q8CD60 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Q8CD60 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms