Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc46a2Q8CA03 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Gm42642-201ENSMUST00000200683 355 ntBASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc46a2Q8CA03 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc46a2Q8CA03 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Mir2861-201ENSMUST00000175539 82 ntBASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Dancr-204ENSMUST00000132389 2347 ntBASIC16.61■□□□□ 0.25
Slc46a2Q8CA03 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Gm2399-201ENSMUST00000104944 225 ntBASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Gm26571-201ENSMUST00000181399 666 ntBASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Gm27405-201ENSMUST00000184201 112 ntBASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Slc46a2Q8CA03 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Gm13401-201ENSMUST00000117074 291 ntBASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Gm18671-201ENSMUST00000214826 683 ntBASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc46a2Q8CA03 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a2Q8CA03 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Slc46a2Q8CA03 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a2Q8CA03 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a2Q8CA03 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a2Q8CA03 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a2Q8CA03 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms