Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Rtp1Q8C8C1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp1Q8C8C1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp1Q8C8C1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtp1Q8C8C1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Gm10052-201ENSMUST00000168019 960 ntBASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Gm7729-201ENSMUST00000050143 801 ntBASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtp1Q8C8C1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
Rtp1Q8C8C1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtp1Q8C8C1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Gm29791-202ENSMUST00000207888 369 ntBASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtp1Q8C8C1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtp1Q8C8C1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtp1Q8C8C1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtp1Q8C8C1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rtp1Q8C8C1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms