Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pabpc5Q8C7D3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pabpc5Q8C7D3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.36■□□□□ 0.37
Pabpc5Q8C7D3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pabpc5Q8C7D3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pabpc5Q8C7D3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pabpc5Q8C7D3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms