Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf3Q8C120 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Gm10517-202ENSMUST00000192970 758 ntBASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3rf3Q8C120 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.02■□□□□ 0.47
Sh3rf3Q8C120 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3rf3Q8C120 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sh3rf3Q8C120 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sh3rf3Q8C120 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sh3rf3Q8C120 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sh3rf3Q8C120 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.98■□□□□ 0.47
Sh3rf3Q8C120 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Gm8520-201ENSMUST00000186517 868 ntBASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sh3rf3Q8C120 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sh3rf3Q8C120 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms