Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ppp4r4Q8C0Y0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ppp4r4Q8C0Y0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ppp4r4Q8C0Y0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.5■□□□□ 0.39
Ppp4r4Q8C0Y0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ppp4r4Q8C0Y0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ppp4r4Q8C0Y0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ppp4r4Q8C0Y0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ppp4r4Q8C0Y0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Mir1199-201ENSMUST00000117015 119 ntBASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ppp4r4Q8C0Y0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ppp4r4Q8C0Y0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ppp4r4Q8C0Y0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms