Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek11Q8C0Q4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Gm37055-201ENSMUST00000191866 133 ntBASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Gm9731-201ENSMUST00000209480 747 ntBASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek11Q8C0Q4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Nek11Q8C0Q4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek11Q8C0Q4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Gm10252-201ENSMUST00000209541 832 ntBASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Gm5417-201ENSMUST00000079706 384 ntBASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nek11Q8C0Q4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Il3ra-202ENSMUST00000223589 738 ntBASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nek11Q8C0Q4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms