Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SprnQ8BWU1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SprnQ8BWU1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SprnQ8BWU1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.29■□□□□ 0.04
SprnQ8BWU1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Nespas-201ENSMUST00000143738 1083 ntBASIC15.29■□□□□ 0.04
SprnQ8BWU1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Gm38285-201ENSMUST00000192928 922 ntBASIC15.29■□□□□ 0.04
SprnQ8BWU1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SprnQ8BWU1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.28■□□□□ 0.04
SprnQ8BWU1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SprnQ8BWU1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SprnQ8BWU1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SprnQ8BWU1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SprnQ8BWU1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.27■□□□□ 0.04
SprnQ8BWU1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.27■□□□□ 0.04
SprnQ8BWU1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.27■□□□□ 0.04
SprnQ8BWU1 Gm6365-201ENSMUST00000054711 744 ntBASIC15.27■□□□□ 0.04
SprnQ8BWU1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SprnQ8BWU1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SprnQ8BWU1 Gm10418-201ENSMUST00000100943 576 ntBASIC15.26■□□□□ 0.03
SprnQ8BWU1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms