Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ppp1r3eQ8BRJ4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ppp1r3eQ8BRJ4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ppp1r3eQ8BRJ4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ppp1r3eQ8BRJ4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm10653-202ENSMUST00000139570 835 ntBASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm6365-201ENSMUST00000054711 744 ntBASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ppp1r3eQ8BRJ4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ppp1r3eQ8BRJ4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ppp1r3eQ8BRJ4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms