Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sfr1Q8BP27 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Timm23-208ENSMUST00000226683 750 ntBASIC17.59■□□□□ 0.41
Sfr1Q8BP27 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sfr1Q8BP27 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sfr1Q8BP27 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sfr1Q8BP27 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sfr1Q8BP27 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sfr1Q8BP27 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sfr1Q8BP27 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Gm10252-201ENSMUST00000209541 832 ntBASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sfr1Q8BP27 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sfr1Q8BP27 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Mir5122-201ENSMUST00000175004 89 ntBASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Mir8112-201ENSMUST00000184382 131 ntBASIC17.57■□□□□ 0.4
Sfr1Q8BP27 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sfr1Q8BP27 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.56■□□□□ 0.4
Sfr1Q8BP27 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Odf3b-204ENSMUST00000227834 930 ntBASIC17.56■□□□□ 0.4
Sfr1Q8BP27 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sfr1Q8BP27 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.55■□□□□ 0.4
Sfr1Q8BP27 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms