Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm10052-201ENSMUST00000168019 960 ntBASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm7729-201ENSMUST00000050143 801 ntBASIC14.67□□□□□ -0.06
Smg1Q8BKX6 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Mir5126-201ENSMUST00000175513 77 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm4995-201ENSMUST00000117247 432 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44357-201ENSMUST00000195897 142 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm19658-201ENSMUST00000196231 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44367-201ENSMUST00000196836 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44350-201ENSMUST00000197197 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44390-201ENSMUST00000197533 144 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44313-201ENSMUST00000198018 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44486-201ENSMUST00000198508 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44454-201ENSMUST00000198541 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44314-201ENSMUST00000199263 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44394-201ENSMUST00000199558 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44484-201ENSMUST00000199873 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44466-201ENSMUST00000200264 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Gm44359-201ENSMUST00000200671 138 ntBASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smg1Q8BKX6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smg1Q8BKX6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm2213-201ENSMUST00000197485 688 ntBASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.64□□□□□ -0.07
Smg1Q8BKX6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Gm37722-201ENSMUST00000193757 208 ntBASIC14.63□□□□□ -0.07
Smg1Q8BKX6 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Mir5131-201ENSMUST00000175426 93 ntBASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.63□□□□□ -0.07
Smg1Q8BKX6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.63□□□□□ -0.07
Smg1Q8BKX6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms