Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm4Q8BKA3 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Srrm4Q8BKA3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Idnk-204ENSMUST00000226010 1898 ntBASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Srrm4Q8BKA3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Shroom3-211ENSMUST00000225438 5742 ntBASIC15□□□□□ -0.01
Srrm4Q8BKA3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Gm13401-201ENSMUST00000117074 291 ntBASIC15□□□□□ -0.01
Srrm4Q8BKA3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 AL672049.1-201ENSMUST00000197943 91 ntBASIC15□□□□□ -0.01
Srrm4Q8BKA3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Gm7712-202ENSMUST00000222331 1510 ntBASIC15□□□□□ -0.01
Srrm4Q8BKA3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15□□□□□ -0.01
Srrm4Q8BKA3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Srrm4Q8BKA3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Mir5122-201ENSMUST00000175004 89 ntBASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Srrm4Q8BKA3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms