Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm14859-201ENSMUST00000117752 357 ntBASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Gm9731-201ENSMUST00000209480 747 ntBASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Usp1Q8BJQ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Gm27389-201ENSMUST00000183622 195 ntBASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Il3ra-202ENSMUST00000223589 738 ntBASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp1Q8BJQ2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Mir1668-201ENSMUST00000184114 107 ntBASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Usp1Q8BJQ2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp1Q8BJQ2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Gm7370-201ENSMUST00000219471 767 ntBASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Gm21559-201ENSMUST00000220638 855 ntBASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Gm8587-201ENSMUST00000076538 843 ntBASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp1Q8BJQ2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp1Q8BJQ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.33■□□□□ 0.53
Usp1Q8BJQ2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp1Q8BJQ2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp1Q8BJQ2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp1Q8BJQ2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Usp1Q8BJQ2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms