Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chmp2bQ8BJF9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chmp2bQ8BJF9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Chmp2bQ8BJF9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.71■□□□□ 0.43
Chmp2bQ8BJF9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Gm11927-201ENSMUST00000118472 759 ntBASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Mir5133-201ENSMUST00000174955 77 ntBASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Chmp2bQ8BJF9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp2bQ8BJF9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms