Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Slc5a7Q8BGY9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Gm26833-201ENSMUST00000180899 440 ntBASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Slc5a7Q8BGY9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Slc5a7Q8BGY9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc5a7Q8BGY9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.21■□□□□ 0.02
Slc5a7Q8BGY9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc5a7Q8BGY9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Slc5a7Q8BGY9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Slc5a7Q8BGY9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Slc5a7Q8BGY9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Slc5a7Q8BGY9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms