Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2af1l4Q8BGJ9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2af1l4Q8BGJ9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
U2af1l4Q8BGJ9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
U2af1l4Q8BGJ9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Gm15375-201ENSMUST00000119510 849 ntBASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Mir6349-201ENSMUST00000184059 97 ntBASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Gm3375-201ENSMUST00000203929 796 ntBASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
U2af1l4Q8BGJ9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Gm10418-201ENSMUST00000100943 576 ntBASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Timm23-208ENSMUST00000226683 750 ntBASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1l4Q8BGJ9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Gm13401-201ENSMUST00000117074 291 ntBASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Gm33142-201ENSMUST00000193913 867 ntBASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1l4Q8BGJ9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Gm6345-202ENSMUST00000180900 204 ntBASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1l4Q8BGJ9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1l4Q8BGJ9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1l4Q8BGJ9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1l4Q8BGJ9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms