Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Samm50Q8BGH2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Mtag2-201ENSMUST00000058665 714 ntBASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Samm50Q8BGH2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samm50Q8BGH2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Samm50Q8BGH2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Samm50Q8BGH2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Gm38285-201ENSMUST00000192928 922 ntBASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samm50Q8BGH2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samm50Q8BGH2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Samm50Q8BGH2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Gm15378-201ENSMUST00000121894 207 ntBASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samm50Q8BGH2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Samm50Q8BGH2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms