Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim6Q8BGE7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trim6Q8BGE7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim6Q8BGE7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.39■□□□□ 0.53
Trim6Q8BGE7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim6Q8BGE7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim6Q8BGE7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim6Q8BGE7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim6Q8BGE7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim6Q8BGE7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms