Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim65Q8BFW4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Trim65Q8BFW4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim65Q8BFW4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim65Q8BFW4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Mir1199-201ENSMUST00000117015 119 ntBASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim65Q8BFW4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim65Q8BFW4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trim65Q8BFW4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim65Q8BFW4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim65Q8BFW4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim65Q8BFW4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim65Q8BFW4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms