Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Gm21559-201ENSMUST00000220638 855 ntBASIC16.52■□□□□ 0.24
Vrk1Q80X41 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Gm8587-201ENSMUST00000076538 843 ntBASIC16.52■□□□□ 0.24
Vrk1Q80X41 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vrk1Q80X41 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.52■□□□□ 0.23
Vrk1Q80X41 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vrk1Q80X41 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Gm37025-201ENSMUST00000195159 829 ntBASIC16.51■□□□□ 0.23
Vrk1Q80X41 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.51■□□□□ 0.23
Vrk1Q80X41 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Vrk1Q80X41 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.5■□□□□ 0.23
Vrk1Q80X41 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Gm9731-201ENSMUST00000209480 747 ntBASIC16.5■□□□□ 0.23
Vrk1Q80X41 Il3ra-202ENSMUST00000223589 738 ntBASIC16.5■□□□□ 0.23
Vrk1Q80X41 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vrk1Q80X41 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.49■□□□□ 0.23
Vrk1Q80X41 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Mir1668-201ENSMUST00000184114 107 ntBASIC16.49■□□□□ 0.23
Vrk1Q80X41 Gm27741-201ENSMUST00000185060 237 ntBASIC16.49■□□□□ 0.23
Vrk1Q80X41 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Ank2-226ENSMUST00000189368 339 ntBASIC16.49■□□□□ 0.23
Vrk1Q80X41 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vrk1Q80X41 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vrk1Q80X41 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Gm7284-201ENSMUST00000131667 944 ntBASIC16.48■□□□□ 0.23
Vrk1Q80X41 Gm17661-201ENSMUST00000170317 270 ntBASIC16.48■□□□□ 0.23
Vrk1Q80X41 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vrk1Q80X41 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vrk1Q80X41 Gm9103-201ENSMUST00000119371 405 ntBASIC16.47■□□□□ 0.23
Vrk1Q80X41 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.47■□□□□ 0.23
Vrk1Q80X41 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.47■□□□□ 0.23
Vrk1Q80X41 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.47■□□□□ 0.23
Vrk1Q80X41 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms