Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Srrm3Q80WV7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.04■□□□□ 0.48
Srrm3Q80WV7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Srrm3Q80WV7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Srrm3Q80WV7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Mir8112-201ENSMUST00000184382 131 ntBASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Srrm3Q80WV7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Srrm3Q80WV7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Srrm3Q80WV7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.02■□□□□ 0.47
Srrm3Q80WV7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Srrm3Q80WV7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18■□□□□ 0.47
Srrm3Q80WV7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18■□□□□ 0.47
Srrm3Q80WV7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18■□□□□ 0.47
Srrm3Q80WV7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18■□□□□ 0.47
Srrm3Q80WV7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Srrm3Q80WV7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Srrm3Q80WV7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Srrm3Q80WV7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Srrm3Q80WV7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms