Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnrc18Q80WC3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnrc18Q80WC3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnrc18Q80WC3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnrc18Q80WC3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnrc18Q80WC3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnrc18Q80WC3 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gm27702-201ENSMUST00000184512 56 ntBASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gm5264-201ENSMUST00000190584 848 ntBASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gm43575-201ENSMUST00000196420 516 ntBASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnrc18Q80WC3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Mir5131-201ENSMUST00000175426 93 ntBASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.25■□□□□ 0.35
Tnrc18Q80WC3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Gm23935-201ENSMUST00000102303 57 ntBASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Gm24270-201ENSMUST00000102326 57 ntBASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Gm24245-201ENSMUST00000157318 57 ntBASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Psmb5-202ENSMUST00000227257 622 ntBASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnrc18Q80WC3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Gm7063-201ENSMUST00000186840 981 ntBASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnrc18Q80WC3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 BC021767-201ENSMUST00000126387 1716 ntBASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.22■□□□□ 0.35
Tnrc18Q80WC3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms