Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim62Q80V85 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trim62Q80V85 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim62Q80V85 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trim62Q80V85 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Trim62Q80V85 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim62Q80V85 Il3ra-202ENSMUST00000223589 738 ntBASIC17.93■□□□□ 0.46
Trim62Q80V85 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Trim62Q80V85 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim62Q80V85 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.92■□□□□ 0.46
Trim62Q80V85 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim62Q80V85 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim62Q80V85 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim62Q80V85 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim62Q80V85 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.91■□□□□ 0.46
Trim62Q80V85 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trim62Q80V85 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trim62Q80V85 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim62Q80V85 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.91■□□□□ 0.46
Trim62Q80V85 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.9■□□□□ 0.46
Trim62Q80V85 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim62Q80V85 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim62Q80V85 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim62Q80V85 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim62Q80V85 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim62Q80V85 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim62Q80V85 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Trim62Q80V85 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trim62Q80V85 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim62Q80V85 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim62Q80V85 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim62Q80V85 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim62Q80V85 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.88■□□□□ 0.45
Trim62Q80V85 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trim62Q80V85 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim62Q80V85 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim62Q80V85 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim62Q80V85 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms