Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Gm3375-201ENSMUST00000203929 796 ntBASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rpp38Q80UU2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Gm9731-201ENSMUST00000209480 747 ntBASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpp38Q80UU2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp38Q80UU2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rpp38Q80UU2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.27■□□□□ 0.35
Rpp38Q80UU2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpp38Q80UU2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rpp38Q80UU2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.25■□□□□ 0.35
Rpp38Q80UU2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rpp38Q80UU2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpp38Q80UU2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpp38Q80UU2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms